Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCCTCAGCCCTAGCTGATGCTGATGCAGA
...((((((.(((((..((((&.))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198426
GeneSymbolCHMP2A
Binding site862,897
Score0.923
Seed0
Au0.397
Energy-19.6
Binding len18
Me-7.99
Phylopstem1.36976755
Phylopflank0.7950083362500001
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure