Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGCCAGGGCTGCC
..((((((..((((.(((((.&)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198436
GeneSymbolAURKA
Binding site1396,1414
Score0.846
Seed1
Au0.485
Energy-20.5
Binding len18
Me-7.991
Phylopstem5.723359333333334
Phylopflank4.261462235
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure