Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAGGTTCGACTGCAGCCGCC
..((.((((((((((......&.)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198436
GeneSymbolAURKA
Binding site1621,1643
Score1.0
Seed0
Au0.426
Energy-19.7
Binding len15
Me-9.309
Phylopstem1.8294577999999997
Phylopflank2.62537392125
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure