Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCTTCCCCTGAACTTGGAGTACGCAACTTACAACATGCAAGCTGCC
..(((((((((((((((((..&.)))))))).)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198441
GeneSymbolPRR20A
Binding site1000,1052
Score1.0
Seed1
Au0.529
Energy-24.5
Binding len21
Me-4.957
Phylopstem0.11278678947368422
Phylopflank-0.12591712500000005
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure