Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCC
..((((((((((((((..(((&)))..))))))).).........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198447
GeneSymbolGOLT1A
Binding site620,666
Score0.846
Seed1
Au0.456
Energy-17.2
Binding len46
Me-4.957
Phylopstem0.7709236025
Phylopflank1.07626011625
Longest consecutive pairings7
Position of longest consecutive pairings34
Pairings in 3prime end6
Position3UTR
2D Structure