Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCAGT
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198449
GeneSymbolEMB
Binding site342,352
Score1.0
Seed1
Au0.676
Energy-16.2
Binding len10
Me-11.418
Phylopstem0.8783503333333333
Phylopflank0.43373864624999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure