Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCCGGGCTGCAC
.(((((((..((((((.....&))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198456
GeneSymbolFAM120C
Binding site346,362
Score0.923
Seed1
Au0.25
Energy-21.6
Binding len16
Me-6.092
Phylopstem1.8133624285714287
Phylopflank1.7151661137500005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure