Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCTCCCAAGCAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198458
GeneSymbolZNF497
Binding site2405,2431
Score0.846
Seed0
Au0.426
Energy-21.8
Binding len26
Me-5.728
Phylopstem0.0561323388888889
Phylopflank-2.51131996125
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure