Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGAACAGCAGGCAGCTGCAGC
((((((((((.(((((.....&.)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198467
GeneSymbolRSBN1L
Binding site198,222
Score0.923
Seed1
Au0.309
Energy-24.0
Binding len19
Me-6.762
Phylopstem-0.20086535
Phylopflank0.16936921250000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure