Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCTCACAACTTGCGGATGCAGCTGCAGA
(((((((((((.(((((((..&.))))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198468
GeneSymbolMMS22L
Binding site2507,2540
Score1.0
Seed1
Au0.515
Energy-27.0
Binding len21
Me-7.284
Phylopstem2.5721794545454553
Phylopflank2.224676005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure