Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTTGGGAAAAAAAGTTTTCAGTGCAGGGCTGCAGCTGA
...((((((((((((((((((&))))))).........................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198468
GeneSymbolMMS22L
Binding site3086,3130
Score0.846
Seed0
Au0.603
Energy-23.0
Binding len44
Me-6.515
Phylopstem1.1367752120930235
Phylopflank1.624010147625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure