Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCCCTGCTTCGCCCGGCCCTGCCCAACTGCAGCTGG
...((((((((((((..(((.&.)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198471
GeneSymbolKANK3
Binding site580,622
Score0.923
Seed0
Au0.25
Energy-25.4
Binding len20
Me-6.748
Phylopstem-0.26582516666666667
Phylopflank0.6050106741250001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure