Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCTCCTCACACCACAGGACTGCAGCCATTAGCTGCGGCTGCGGT
(((((((((((((((...(((&.)))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198476
GeneSymbolC19orf54
Binding site1694,1743
Score1.0
Seed1
Au0.397
Energy-26.0
Binding len22
Me-4.171
Phylopstem0.3834623905333335
Phylopflank1.1188618839500002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure