Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGGAGATGGCTCCAGGAAGGCGGCCAAGAATGTGA
(((((((((((((((((((...&.)).))))))))).))))).....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198477
GeneSymbolCXCL17
Binding site228,266
Score0.846
Seed1
Au0.456
Energy-24.6
Binding len28
Me-3.938
Phylopstem-0.34392895769230775
Phylopflank-0.23266741125
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure