Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGGGGCTGCCT
....(((((((((((((((...&))))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198478
GeneSymbolNKPD1
Binding site444,462
Score1.0
Seed0
Au0.353
Energy-24.8
Binding len18
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure