Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCTATGACCGCAGAATTCCTCTCCCTGCT
..(((((((((((((((..((&))..)))))))))))...........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198481
GeneSymbolVSTM1
Binding site115,146
Score0.846
Seed1
Au0.412
Energy-20.3
Binding len31
Me-4.957
Phylopstem-0.16587289653846152
Phylopflank-0.34810192325
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end6
Position5UTR
2D Structure