Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGCCCAGGCCACACAGCTGCAC
.((((((((.((((....(((&.)))..))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198491
GeneSymbolCIBAR2
Binding site3,30
Score0.846
Seed1
Au0.271
Energy-20.1
Binding len22
Me-6.004
Phylopstem2.287882125
Phylopflank0.5581983933333334
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure