Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGTT
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198498
GeneSymbolC11orf53
Binding site285,295
Score0.846
Seed1
Au0.456
Energy-15.3
Binding len10
Me-14.466
Phylopstem-0.5322124444444445
Phylopflank0.45557326724999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure