Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAGCCTGGATTGCCAAAGAGCAGCCCCAGGAAGAGGCCGGG
..((((((.(((((((((....&.))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198501
GeneSymbolSMTNL2
Binding site1084,1127
Score0.827
Seed1
Au0.338
Energy-26.2
Binding len18
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure