Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGAGCCCAGCTGTG
..(((((((.((((..((((.&))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198501
GeneSymbolSMTNL2
Binding site1220,1238
Score1.0
Seed1
Au0.471
Energy-22.4
Binding len18
Me-7.168
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure