Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCGGGAGGCTGCGGTTGCAGT
((((((((((((((....(((&))).....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350705
GeneSymbolDGKB
Binding site6705,6728
Score0.846
Seed1
Au0.441
Energy-21.1
Binding len23
Me-4.906
Phylopstem0.4359941428571429
Phylopflank0.88829221
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure