Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATACTATCACCATCAGCCGCAGTTCTATATCTTTGCGAG
(((((((((((((((...(((&.)))..))))))))))..........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198510
GeneSymbolITIH6
Binding site3504,3547
Score0.846
Seed1
Au0.456
Energy-22.5
Binding len32
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure