Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGCCCGTGGCCCCAAG
(((..(((((((((((.((((&)))).)))))).)))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198510
GeneSymbolITIH6
Binding site1600,1623
Score0.923
Seed0
Au0.368
Energy-20.7
Binding len23
Me-11.089
Phylopstem-0.011093555833333343
Phylopflank0.20767024150000002
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure