Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGCTGCAGC
(((((((((((((.((.....&.)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198513
GeneSymbolPHF20L1
Binding site716,761
Score0.923
Seed1
Au0.529
Energy-25.1
Binding len18
Me-4.794
Phylopstem3.2886929538461542
Phylopflank2.5293408050000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure