Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTACAGCCTGCAGA
......((((((((((((((.&))).))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198515
GeneSymbolCCDC172
Binding site1625,1642
Score0.846
Seed0
Au0.559
Energy-18.5
Binding len17
Me-15.567
Phylopstem4.15215
Phylopflank2.9367772628749993
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure