Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACATTGACCGCTGCGAG
(((((((.((((.((((((..&))))))))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198521
GeneSymbolC12orf42
Binding site1161,1181
Score0.846
Seed1
Au0.426
Energy-18.4
Binding len20
Me-7.54
Phylopstem7.5071771428571425
Phylopflank4.873760955000002
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure