Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCGCGATGGGCTCTGAGGCGGCGCAGCTGCT
..((((((((.(((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198527
GeneSymbolHDDC3
Binding site22,55
Score1.0
Seed1
Au0.265
Energy-21.8
Binding len15
Me-7.782
Phylopstem0.07711449999999997
Phylopflank0.1242973130555555
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure