Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGACTTCGCGGCTCGCAAG
((((((((((((..((..(((&))).)).)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198527
GeneSymbolHDDC3
Binding site62,83
Score0.846
Seed1
Au0.265
Energy-20.6
Binding len21
Me-6.084
Phylopstem0.4027274923076923
Phylopflank0.06233322500000009
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure