Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGCAGCCACCAGGGTCCCGATCCCTACCGCCAGCTGCGAG
(((((((((((((....(((.&.)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198536
GeneSymbolTMEM205
Binding site1038,1082
Score0.923
Seed1
Au0.338
Energy-23.4
Binding len19
Me-5.763
Phylopstem0.4056473571428571
Phylopflank-0.040992045000000005
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure