Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCCTGGGGAAGGCAGTCATGGCTAGAGCAGATTTGGAACGCAGGGCCTG
((.((((((.((((((((...&.))))))))..........................)))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_198537
GeneSymbolYJEFN3
Binding site171,221
Score0.923
Seed0
Au0.353
Energy-25.4
Binding len45
Me-6.738
Phylopstem1.6946101625
Phylopflank1.6167687712499996
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end5
PositionCDS
2D Structure