Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTGCGGTTGCAGA
(((((((((((((((......&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198546
GeneSymbolSPATA21
Binding site1546,1564
Score0.923
Seed1
Au0.382
Energy-23.3
Binding len17
Me-4.171
Phylopstem-0.03874405333333333
Phylopflank0.12797244837500002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure