Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTTAAGAGATGGGGTCTCGCTCTATTGCCCAGGCTGGAGTGCAGTGT
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198549
GeneSymbolMIGA1
Binding site3859,3909
Score0.846
Seed1
Au0.456
Energy-27.7
Binding len24
Me-10.109
Phylopstem0.2159830636363637
Phylopflank-0.22904517624999998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure