Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAAGTGGAGGCTGCAGTGA
(((((((((((((((((((...&)))))))))..)))).)..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198549
GeneSymbolMIGA1
Binding site2895,2920
Score0.846
Seed1
Au0.412
Energy-23.7
Binding len25
Me-3.938
Phylopstem-0.02426037916666666
Phylopflank0.12273973250000005
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure