Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGCTTCATCTCAGAGGCTGCCAACCTGGTGCTGCTCAGGGTG
..((((((((((((((((...&)))..........))))))))................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_198559
GeneSymbolCATIP
Binding site534,577
Score0.846
Seed1
Au0.368
Energy-22.2
Binding len43
Me-4.957
Phylopstem0.16546116666666666
Phylopflank0.10999228000000005
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end5
PositionCDS
2D Structure