Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGGCCCCGCCAGCCGCTGGTGTGCAGAGGTCA
.(((((((((((((((((...&)))))))).................))))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_198563
GeneSymbolSTIMATE
Binding site1006,1042
Score0.846
Seed1
Au0.324
Energy-28.6
Binding len36
Me-3.793
Phylopstem-0.025391137142857154
Phylopflank-0.059002117500000006
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure