Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCTGAGGGCGCTGGTT
.((((((.(((((..(((.((.&))))).))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198566
GeneSymbolC5orf34
Binding site20,39
Score0.846
Seed1
Au0.412
Energy-19.0
Binding len19
Me-7.699
Phylopstem2.1328181666666666
Phylopflank1.0718001094772724
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure