Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTTGTAATGGCAGCTGA
...(((((((.((((((((((&))).))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198566
GeneSymbolC5orf34
Binding site370,390
Score1.0
Seed0
Au0.632
Energy-21.3
Binding len20
Me-9.339
Phylopstem1.606506309090909
Phylopflank1.7475751237500001
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position5UTR
2D Structure