Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTGCGCTGCAAA
(((((((.((((....(((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198567
GeneSymbolSIMC1
Binding site983,1000
Score0.846
Seed1
Au0.559
Energy-19.6
Binding len17
Me-9.366
Phylopstem0.9563815714285714
Phylopflank2.3106493775
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure