Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCCAGGGCCCACTGGGCCAGC
..(((((((..(((((((((..&)))))))))......))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198572
GeneSymbolSPATC1
Binding site106,129
Score0.872
Seed1
Au0.353
Energy-22.7
Binding len23
Me-9.024
Phylopstem-0.4560157555555555
Phylopflank-0.10699215009999996
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end6
Position5UTR
2D Structure