Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACTCACCAATTATGAAGGGCTTCGGCATCAGATAGAGAGGCTGGTGC
((((((((((((((((((((((&))))))))........))))))...................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_198572
GeneSymbolSPATC1
Binding site241,291
Score0.923
Seed1
Au0.515
Energy-21.2
Binding len50
Me-3.938
Phylopstem0.024982161877551007
Phylopflank0.32033867734999993
Longest consecutive pairings8
Position of longest consecutive pairings42
Pairings in 3prime end8
PositionCDS
2D Structure