Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCAGCCCAGCGCC
..((.((((.(((((((((.(&).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198572
GeneSymbolSPATC1
Binding site542,560
Score0.923
Seed0
Au0.324
Energy-21.7
Binding len18
Me-10.319
Phylopstem0.19178097777777778
Phylopflank0.3166665258
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure