Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCTTCCGCAGCTGCT
..((((((((((..(((....&.)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330536
GeneSymbolCENPX
Binding site331,381
Score0.846
Seed1
Au0.368
Energy-25.8
Binding len17
Me-7.103
Phylopstem-0.7846730999999998
Phylopflank-0.8721653975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure