Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAGGTGAAACTAAAAACAACAGGATTAGAGGAGGCGGCTGA
(((((.(((((((((((((((.&))))))))).........................)))))).))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001350742
GeneSymbolSRPK2
Binding site1185,1233
Score0.846
Seed0
Au0.515
Energy-27.5
Binding len48
Me-5.839
Phylopstem-0.10477588249999999
Phylopflank0.21340403524999998
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end7
PositionCDS
2D Structure