Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATCACCTCAGCTGCAC
.((((((((.((((((.....&)))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350742
GeneSymbolSRPK2
Binding site1142,1160
Score0.923
Seed1
Au0.574
Energy-19.6
Binding len18
Me-5.036
Phylopstem0.27704
Phylopflank0.06818356625000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure