Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATGCTGGAGCTGCGAG
((((((((.((((....((((&))))...)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198593
GeneSymbolC1QTNF1
Binding site952,973
Score0.846
Seed1
Au0.397
Energy-24.3
Binding len21
Me-6.819
Phylopstem3.56675875
Phylopflank5.740043374999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure