Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGTTCGCGCAGGTGGGCGACCGCAGCATCATGCAAA
((((((((((((((((.....&.)))))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198594
GeneSymbolC1QTNF1
Binding site828,868
Score0.923
Seed1
Au0.382
Energy-25.3
Binding len22
Me-3.938
Phylopstem1.23814198
Phylopflank1.627290995
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure