Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTGGGGCCAGGG
.((((((...(((.((((....&)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_198595
GeneSymbolAFAP1
Binding site3322,3338
Score0.846
Seed1
Au0.412
Energy-18.8
Binding len16
Me-9.263
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure