Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCGCTGCAACCGCTGCAAA
((((((((((((.(((((((.&))))))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198597
GeneSymbolSEC24C
Binding site1358,1381
Score0.808
Seed1
Au0.471
Energy-23.3
Binding len23
Me-5.227
Phylopstem6.705877886666666
Phylopflank4.60341861625
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure