Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTGGCCAGGCTGCAT
.(((((((..((((((((((.&)))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198597
GeneSymbolSEC24C
Binding site322,341
Score1.0
Seed1
Au0.426
Energy-22.1
Binding len19
Me-6.092
Phylopstem0.8194587
Phylopflank0.9348165912499999
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure