Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAGCCTGGAGCTGA
...(((((.(((((((.(((.&))))))))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198597
GeneSymbolSEC24C
Binding site2841,2859
Score0.923
Seed0
Au0.471
Energy-21.1
Binding len18
Me-7.571
Phylopstem3.3008157500000004
Phylopflank5.8275057225
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure